Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
---|---|---|---|---|---|---|---|---|---|
KIRP | rs12932022 | chr16:20519860 | T/C | 0.000636 | 209 | 15.33 | 13.1 | 11.43 | KM Plot |
KIRP | rs12932087 | chr16:20441020 | G/A | 0.000361 | 211 | 16.45 | 16.72 | 1.73 | KM Plot |
KIRP | rs12935569 | chr16:20445144 | T/C | 0.000335 | 214 | 16.47 | 15.02 | 1.73 | KM Plot |
KIRP | rs12985946 | chr19:57489068 | A/G | 1.15E-5 | 214 | 19.87 | 18 | 15.07 | KM Plot |
KIRP | rs13033936 | chr2:119666110 | G/A | 0 | 212 | 15.88 | 19.47 | 5.27 | KM Plot |
KIRP | rs13039043 | chr20:37225596 | C/T | 4.44E-16 | 212 | 6.7 | 21.47 | 16.43 | KM Plot |
KIRP | rs13046723 | chr21:26071526 | T/G | 0.00056 | 213 | 10.83 | 17.07 | 17.75 | KM Plot |
KIRP | rs13046845 | chr21:26071623 | T/G | 0.000527 | 213 | 10.93 | 17.13 | 17.75 | KM Plot |
KIRP | rs13047291 | chr21:26071944 | T/C | 0.000102 | 211 | 10.83 | 18 | 17.03 | KM Plot |
KIRP | rs13053043 | chr21:26071501 | C/A | 0.000527 | 214 | 10.83 | 17.13 | 17.75 | KM Plot |
KIRP | rs13062429 | chr3:49559485 | A/G | 0.000386 | 212 | 19.53 | 16.97 | 14.13 | KM Plot |
KIRP | rs13072367 | chr3:100026963 | G/C | 4.46E-5 | 210 | 16.43 | 18.47 | 4.67 | KM Plot |
KIRP | rs13074365 | chr3:99977509 | T/A | 2.01E-5 | 214 | 16.45 | 18.47 | 4.67 | KM Plot |
KIRP | rs13075241 | chr3:99987683 | G/C | 2.19E-5 | 214 | 16.43 | 18.88 | 4.67 | KM Plot |
KIRP | rs13078920 | chr3:99940385 | G/A | 3.3E-8 | 211 | 16.47 | 19.6 | 4.37 | KM Plot |